Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Gm4899-201ENSMUST00000178708 719 ntBASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Gm44492-201ENSMUST00000197012 141 ntBASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Gm7787-201ENSMUST00000216858 688 ntBASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sh2d4bA6X942 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Gm5312-201ENSMUST00000203728 547 ntBASIC16.3■□□□□ 0.2
Sh2d4bA6X942 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sh2d4bA6X942 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2d4bA6X942 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2d4bA6X942 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.29■□□□□ 0.2
Sh2d4bA6X942 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Sh2d4bA6X942 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2d4bA6X942 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2d4bA6X942 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2d4bA6X942 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.29■□□□□ 0.2
Sh2d4bA6X942 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Sh2d4bA6X942 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.29■□□□□ 0.2
Sh2d4bA6X942 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2d4bA6X942 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms