Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Chd6A3KFM7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Gm38158-201ENSMUST00000194617 339 ntBASIC12.26□□□□□ -0.45
Chd6A3KFM7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.26□□□□□ -0.45
Chd6A3KFM7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd6A3KFM7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Gm27516-201ENSMUST00000184237 98 ntBASIC12.25□□□□□ -0.45
Chd6A3KFM7 Gm10766-202ENSMUST00000194123 606 ntBASIC12.25□□□□□ -0.45
Chd6A3KFM7 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.25□□□□□ -0.45
Chd6A3KFM7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Chd6A3KFM7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.25□□□□□ -0.45
Chd6A3KFM7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd6A3KFM7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd6A3KFM7 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Gm12341-201ENSMUST00000119724 503 ntBASIC12.24□□□□□ -0.45
Chd6A3KFM7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Gm8969-201ENSMUST00000199694 526 ntBASIC12.24□□□□□ -0.45
Chd6A3KFM7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.24□□□□□ -0.45
Chd6A3KFM7 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd6A3KFM7 Gm28911-201ENSMUST00000188837 117 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms