Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc112A0AUP1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc112A0AUP1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc112A0AUP1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc112A0AUP1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc112A0AUP1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
Ccdc112A0AUP1 Gm15358-201ENSMUST00000119249 520 ntBASIC17.42■□□□□ 0.38
Ccdc112A0AUP1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc112A0AUP1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc112A0AUP1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc112A0AUP1 Gm27357-201ENSMUST00000183754 135 ntBASIC17.42■□□□□ 0.38
Ccdc112A0AUP1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.42■□□□□ 0.38
Ccdc112A0AUP1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc112A0AUP1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc112A0AUP1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc112A0AUP1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc112A0AUP1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc112A0AUP1 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Gm7284-201ENSMUST00000131667 944 ntBASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc112A0AUP1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccdc112A0AUP1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms