Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhgb8A0A140LI48 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhgb8A0A140LI48 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Gm27459-201ENSMUST00000184860 107 ntBASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhgb8A0A140LI48 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhgb8A0A140LI48 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhgb8A0A140LI48 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhgb8A0A140LI48 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdhgb8A0A140LI48 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhgb8A0A140LI48 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhgb8A0A140LI48 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhgb8A0A140LI48 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms