Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Spcs1-207ENSMUST00000228767 1008 ntBASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav9d-4A0A0G2JG37 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Mir5122-201ENSMUST00000175004 89 ntBASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9d-4A0A0G2JG37 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm2274-201ENSMUST00000184539 609 ntBASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav9d-4A0A0G2JG37 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9d-4A0A0G2JG37 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9d-4A0A0G2JG37 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9d-4A0A0G2JG37 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9d-4A0A0G2JG37 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9d-4A0A0G2JG37 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Trav9d-4A0A0G2JG37 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Trav9d-4A0A0G2JG37 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9d-4A0A0G2JG37 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav9d-4A0A0G2JG37 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms