Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3n-3A0A0G2JEM0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Efs-202ENSMUST00000227037 2540 ntBASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm10812-201ENSMUST00000099864 546 ntBASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms