Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6n-6A0A075B6B2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Mir770-201ENSMUST00000103252 94 ntBASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm11950-201ENSMUST00000121615 838 ntBASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6n-6A0A075B6B2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm14859-201ENSMUST00000117752 357 ntBASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6n-6A0A075B6B2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms