Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Gm15165-201ENSMUST00000118140 502 ntBASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Gm14859-201ENSMUST00000117752 357 ntBASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Gm25745-201ENSMUST00000174945 133 ntBASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Gm27867-201ENSMUST00000184778 125 ntBASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Gm7367-201ENSMUST00000057611 492 ntBASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav5-4A0A075B652 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms