Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav16d-dv11A0A075B617 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm10698-201ENSMUST00000182663 604 ntBASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav16d-dv11A0A075B617 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm5643-201ENSMUST00000117081 966 ntBASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm27463-201ENSMUST00000183569 57 ntBASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav16d-dv11A0A075B617 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 151.6 ms