Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav4n-4A0A075B615 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav4n-4A0A075B615 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav4n-4A0A075B615 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav4n-4A0A075B615 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav4n-4A0A075B615 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav4n-4A0A075B615 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav4n-4A0A075B615 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav4n-4A0A075B615 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav4n-4A0A075B615 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Gm9856-201ENSMUST00000217077 2578 ntBASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav4n-4A0A075B615 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Gm2011-201ENSMUST00000203124 1263 ntBASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav4n-4A0A075B615 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms