Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Rps4l-201ENSMUST00000071745 943 ntBASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb2S4R1M3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb2S4R1M3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb2S4R1M3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
H2afb2S4R1M3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb2S4R1M3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
H2afb2S4R1M3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb2S4R1M3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb2S4R1M3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb2S4R1M3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb2S4R1M3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb2S4R1M3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
H2afb2S4R1M3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb2S4R1M3 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.27■□□□□ 0.04
H2afb2S4R1M3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.27■□□□□ 0.04
H2afb2S4R1M3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb2S4R1M3 Gm7153-201ENSMUST00000117092 455 ntBASIC15.27■□□□□ 0.04
H2afb2S4R1M3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
H2afb2S4R1M3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb2S4R1M3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb2S4R1M3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
H2afb2S4R1M3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
H2afb2S4R1M3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
H2afb2S4R1M3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
H2afb2S4R1M3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
H2afb2S4R1M3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
H2afb2S4R1M3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
H2afb2S4R1M3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.27■□□□□ 0.03
H2afb2S4R1M3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
H2afb2S4R1M3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
H2afb2S4R1M3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
H2afb2S4R1M3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb2S4R1M3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms