Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
H2afb3S4R1G7 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
H2afb3S4R1G7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.77□□□□□ -0.2
H2afb3S4R1G7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
H2afb3S4R1G7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
H2afb3S4R1G7 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
H2afb3S4R1G7 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
H2afb3S4R1G7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Gm19164-201ENSMUST00000210667 640 ntBASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb3S4R1G7 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Gm15165-201ENSMUST00000118140 502 ntBASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Gm14722-201ENSMUST00000118943 689 ntBASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.75□□□□□ -0.21
H2afb3S4R1G7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb3S4R1G7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms