Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn8aQ9WTU3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn8aQ9WTU3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn8aQ9WTU3 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn8aQ9WTU3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms