Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm9520-201ENSMUST00000209460 1253 ntBASIC13.44□□□□□ -0.26
Nubp1Q9R060 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nubp1Q9R060 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Gm22175-201ENSMUST00000175007 78 ntBASIC13.43□□□□□ -0.26
Nubp1Q9R060 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Gm43474-201ENSMUST00000196415 774 ntBASIC13.43□□□□□ -0.26
Nubp1Q9R060 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Gm45610-201ENSMUST00000209227 784 ntBASIC13.43□□□□□ -0.26
Nubp1Q9R060 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Gm17917-201ENSMUST00000218561 953 ntBASIC13.43□□□□□ -0.26
Nubp1Q9R060 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.43□□□□□ -0.26
Nubp1Q9R060 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.43□□□□□ -0.26
Nubp1Q9R060 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.43□□□□□ -0.26
Nubp1Q9R060 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nubp1Q9R060 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.42□□□□□ -0.26
Nubp1Q9R060 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Mir449b-201ENSMUST00000104833 80 ntBASIC13.42□□□□□ -0.26
Nubp1Q9R060 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.42□□□□□ -0.26
Nubp1Q9R060 Gm15968-201ENSMUST00000119342 1168 ntBASIC13.42□□□□□ -0.26
Nubp1Q9R060 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Gm18889-201ENSMUST00000174284 929 ntBASIC13.42□□□□□ -0.26
Nubp1Q9R060 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.42□□□□□ -0.26
Nubp1Q9R060 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.42□□□□□ -0.26
Nubp1Q9R060 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.42□□□□□ -0.26
Nubp1Q9R060 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.42□□□□□ -0.26
Nubp1Q9R060 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nubp1Q9R060 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms