Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1aQ9QWF0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1aQ9QWF0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.13■□□□□ 0.33
Chaf1aQ9QWF0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chaf1aQ9QWF0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Mir3081-201ENSMUST00000175305 84 ntBASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Gm27742-201ENSMUST00000184667 60 ntBASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chaf1aQ9QWF0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chaf1aQ9QWF0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chaf1aQ9QWF0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms