Protein–RNA interactions for Protein: Q9JKY0

Cnot9, CCR4-NOT transcription complex subunit 9, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot9Q9JKY0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cnot9Q9JKY0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Gm34391-201ENSMUST00000203706 907 ntBASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Gm10819-201ENSMUST00000099988 561 ntBASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cnot9Q9JKY0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Gm15358-201ENSMUST00000119249 520 ntBASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cnot9Q9JKY0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Gm44357-201ENSMUST00000195897 142 ntBASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Gm19658-201ENSMUST00000196231 138 ntBASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Gm44367-201ENSMUST00000196836 138 ntBASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Gm44350-201ENSMUST00000197197 138 ntBASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Gm44390-201ENSMUST00000197533 144 ntBASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Gm44313-201ENSMUST00000198018 138 ntBASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Gm44486-201ENSMUST00000198508 138 ntBASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Gm44314-201ENSMUST00000199263 138 ntBASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Gm44394-201ENSMUST00000199558 138 ntBASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Gm44484-201ENSMUST00000199873 138 ntBASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Gm44466-201ENSMUST00000200264 138 ntBASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Gm44359-201ENSMUST00000200671 138 ntBASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Birc2-201ENSMUST00000054878 378 ntBASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cnot9Q9JKY0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Cnot9Q9JKY0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cnot9Q9JKY0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Cnot9Q9JKY0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cnot9Q9JKY0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms