Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClpxQ9JHS4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClpxQ9JHS4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClpxQ9JHS4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClpxQ9JHS4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClpxQ9JHS4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClpxQ9JHS4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ClpxQ9JHS4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClpxQ9JHS4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClpxQ9JHS4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClpxQ9JHS4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.02□□□□□ -0.17
ClpxQ9JHS4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.02□□□□□ -0.17
ClpxQ9JHS4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClpxQ9JHS4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClpxQ9JHS4 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.02□□□□□ -0.17
ClpxQ9JHS4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClpxQ9JHS4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClpxQ9JHS4 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.02□□□□□ -0.17
ClpxQ9JHS4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClpxQ9JHS4 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClpxQ9JHS4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.02□□□□□ -0.17
ClpxQ9JHS4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClpxQ9JHS4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClpxQ9JHS4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
ClpxQ9JHS4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
ClpxQ9JHS4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ClpxQ9JHS4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Gm10459-201ENSMUST00000202708 1155 ntBASIC14□□□□□ -0.17
ClpxQ9JHS4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Gm10819-201ENSMUST00000099988 561 ntBASIC14□□□□□ -0.17
ClpxQ9JHS4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14□□□□□ -0.17
ClpxQ9JHS4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
ClpxQ9JHS4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ClpxQ9JHS4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpxQ9JHS4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpxQ9JHS4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpxQ9JHS4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ClpxQ9JHS4 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpxQ9JHS4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ClpxQ9JHS4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpxQ9JHS4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpxQ9JHS4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ClpxQ9JHS4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ClpxQ9JHS4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.99□□□□□ -0.17
ClpxQ9JHS4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ClpxQ9JHS4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ClpxQ9JHS4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ClpxQ9JHS4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms