Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim39Q9ESN2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim39Q9ESN2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trim39Q9ESN2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim39Q9ESN2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim39Q9ESN2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim39Q9ESN2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Rprl3-201ENSMUST00000157400 290 ntBASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Mir3081-201ENSMUST00000175305 84 ntBASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Gm7367-201ENSMUST00000057611 492 ntBASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim39Q9ESN2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim39Q9ESN2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim39Q9ESN2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim39Q9ESN2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms