Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Ube4bQ9ES00 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ube4bQ9ES00 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Ube4bQ9ES00 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ube4bQ9ES00 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ube4bQ9ES00 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ube4bQ9ES00 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4bQ9ES00 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Gm5417-201ENSMUST00000079706 384 ntBASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4bQ9ES00 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms