Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Gm14722-201ENSMUST00000118943 689 ntBASIC15.31■□□□□ 0.04
Vps35Q9EQH3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 AV026068-213ENSMUST00000223675 1171 ntBASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps35Q9EQH3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Gm11764-201ENSMUST00000120221 623 ntBASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Gm18733-201ENSMUST00000173950 856 ntBASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Mir5131-201ENSMUST00000175426 93 ntBASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Mir5126-201ENSMUST00000175513 77 ntBASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Gm2651-201ENSMUST00000203560 838 ntBASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Vps35Q9EQH3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms