Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgn3Q9DCB1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgn3Q9DCB1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgn3Q9DCB1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms