Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mbd3l1Q9D9H3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Matn2-206ENSMUST00000228570 2798 ntBASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Mbd3l1Q9D9H3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Mbd3l1Q9D9H3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Mbd3l1Q9D9H3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Mbd3l1Q9D9H3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Mbd3l1Q9D9H3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Mbd3l1Q9D9H3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Mbd3l1Q9D9H3 Cap2-205ENSMUST00000225824 1634 ntBASIC13.21□□□□□ -0.3
Mbd3l1Q9D9H3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Mbd3l1Q9D9H3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Gm9731-201ENSMUST00000209480 747 ntBASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mbd3l1Q9D9H3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Gm7291-201ENSMUST00000199147 382 ntBASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mbd3l1Q9D9H3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms