Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Gm11643-201ENSMUST00000119578 864 ntBASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Mir2861-201ENSMUST00000175539 82 ntBASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tmem88Q9D0N8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Gm13401-201ENSMUST00000117074 291 ntBASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Acot6-202ENSMUST00000222921 3622 ntBASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tmem88Q9D0N8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Gm8520-201ENSMUST00000186517 868 ntBASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tmem88Q9D0N8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms