Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Gm8520-201ENSMUST00000186517 868 ntBASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1lQ9CXF7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 Gm13559-201ENSMUST00000120476 863 ntBASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Chd1lQ9CXF7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd1lQ9CXF7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd1lQ9CXF7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd1lQ9CXF7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd1lQ9CXF7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd1lQ9CXF7 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd1lQ9CXF7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd1lQ9CXF7 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Gm9987-201ENSMUST00000069768 567 ntBASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.26■□□□□ 0.35
Chd1lQ9CXF7 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Carlr-201ENSMUST00000181515 2574 ntBASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.25■□□□□ 0.35
Chd1lQ9CXF7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.24■□□□□ 0.35
Chd1lQ9CXF7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1lQ9CXF7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1lQ9CXF7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1lQ9CXF7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Chd1lQ9CXF7 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms