Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.99■□□□□ 0.47
Smc3Q9CW03 Gm7506-201ENSMUST00000207758 815 ntBASIC17.99■□□□□ 0.47
Smc3Q9CW03 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.99■□□□□ 0.47
Smc3Q9CW03 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.99■□□□□ 0.47
Smc3Q9CW03 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Gm12497-201ENSMUST00000138778 237 ntBASIC17.98■□□□□ 0.47
Smc3Q9CW03 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.98■□□□□ 0.47
Smc3Q9CW03 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc3Q9CW03 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.98■□□□□ 0.47
Smc3Q9CW03 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Gm8344-201ENSMUST00000119813 856 ntBASIC17.97■□□□□ 0.47
Smc3Q9CW03 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.97■□□□□ 0.47
Smc3Q9CW03 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.97■□□□□ 0.47
Smc3Q9CW03 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.97■□□□□ 0.47
Smc3Q9CW03 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc3Q9CW03 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc3Q9CW03 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.96■□□□□ 0.47
Smc3Q9CW03 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Efs-202ENSMUST00000227037 2540 ntBASIC17.96■□□□□ 0.47
Smc3Q9CW03 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smc3Q9CW03 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc3Q9CW03 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc3Q9CW03 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Smc3Q9CW03 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms