Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Gm5177-201ENSMUST00000183092 997 ntBASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lsm7Q9CQQ8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Thap2-203ENSMUST00000218989 527 ntBASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lsm7Q9CQQ8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lsm7Q9CQQ8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
Lsm7Q9CQQ8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 Gm17968-201ENSMUST00000194902 784 ntBASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lsm7Q9CQQ8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms