Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Gm6659-201ENSMUST00000174752 547 ntBASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Gm29518-201ENSMUST00000190858 372 ntBASIC14.46□□□□□ -0.09
Ska1Q9CPV1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ska1Q9CPV1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ska1Q9CPV1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ska1Q9CPV1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ska1Q9CPV1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ska1Q9CPV1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ska1Q9CPV1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ska1Q9CPV1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ska1Q9CPV1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Ska1Q9CPV1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ska1Q9CPV1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.46□□□□□ -0.1
Ska1Q9CPV1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ska1Q9CPV1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Efs-202ENSMUST00000227037 2540 ntBASIC14.45□□□□□ -0.1
Ska1Q9CPV1 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.45□□□□□ -0.1
Ska1Q9CPV1 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ska1Q9CPV1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ska1Q9CPV1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ska1Q9CPV1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms