Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Gm13436-201ENSMUST00000120418 567 ntBASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Krt88Q9CPR6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Krt88Q9CPR6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.79□□□□□ -0.2
Krt88Q9CPR6 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.79□□□□□ -0.2
Krt88Q9CPR6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Krt88Q9CPR6 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms