Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Mir449b-201ENSMUST00000104833 80 ntBASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.52□□□□□ -0.4
Prpf8Q99PV0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Prpf8Q99PV0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Prpf8Q99PV0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Prpf8Q99PV0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Prpf8Q99PV0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.52□□□□□ -0.4
Prpf8Q99PV0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Prpf8Q99PV0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Prpf8Q99PV0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.52□□□□□ -0.4
Prpf8Q99PV0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Prpf8Q99PV0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Prpf8Q99PV0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prpf8Q99PV0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.51□□□□□ -0.41
Prpf8Q99PV0 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.51□□□□□ -0.41
Prpf8Q99PV0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prpf8Q99PV0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Gm11424-201ENSMUST00000121929 829 ntBASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Gm5745-201ENSMUST00000183748 313 ntBASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Prpf8Q99PV0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms