Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim11Q99PQ2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Gm4535-201ENSMUST00000182274 558 ntBASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Gm8318-201ENSMUST00000182954 872 ntBASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Gm28033-201ENSMUST00000184224 96 ntBASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Gm21362-201ENSMUST00000194272 928 ntBASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Gm10355-201ENSMUST00000097146 517 ntBASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim11Q99PQ2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Gm27646-201ENSMUST00000183989 110 ntBASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim11Q99PQ2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim11Q99PQ2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.39■□□□□ 0.38
Trim11Q99PQ2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim11Q99PQ2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms