Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm37153-201ENSMUST00000193637 231 ntBASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.39■□□□□ 0.21
Tlr3Q99MB1 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Gm6550-201ENSMUST00000187574 993 ntBASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Tlr3Q99MB1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tlr3Q99MB1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Sybu-209ENSMUST00000228639 4113 ntBASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tlr3Q99MB1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tlr3Q99MB1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms