Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc1bQ920F6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Gm20949-201ENSMUST00000206478 952 ntBASIC17.61■□□□□ 0.41
Smc1bQ920F6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc1bQ920F6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smc1bQ920F6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.6■□□□□ 0.41
Smc1bQ920F6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc1bQ920F6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc1bQ920F6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc1bQ920F6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc1bQ920F6 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Smc1bQ920F6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc1bQ920F6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc1bQ920F6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.59■□□□□ 0.41
Smc1bQ920F6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.59■□□□□ 0.41
Smc1bQ920F6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc1bQ920F6 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.59■□□□□ 0.41
Smc1bQ920F6 Mir6404-201ENSMUST00000183699 94 ntBASIC17.59■□□□□ 0.41
Smc1bQ920F6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smc1bQ920F6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc1bQ920F6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smc1bQ920F6 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.59■□□□□ 0.41
Smc1bQ920F6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Smc1bQ920F6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc1bQ920F6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc1bQ920F6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
Smc1bQ920F6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc1bQ920F6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc1bQ920F6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Smc1bQ920F6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.58■□□□□ 0.41
Smc1bQ920F6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc1bQ920F6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Smc1bQ920F6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc1bQ920F6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc1bQ920F6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.58■□□□□ 0.41
Smc1bQ920F6 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.58■□□□□ 0.4
Smc1bQ920F6 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smc1bQ920F6 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms