Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Mir3113-201ENSMUST00000175478 76 ntBASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Mir8117-201ENSMUST00000184773 107 ntBASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Gm2213-201ENSMUST00000197485 688 ntBASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdha11Q91Y19 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Gm13597-201ENSMUST00000121239 375 ntBASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdha11Q91Y19 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha11Q91Y19 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdha11Q91Y19 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdha11Q91Y19 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha11Q91Y19 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha11Q91Y19 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha11Q91Y19 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha11Q91Y19 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdha11Q91Y19 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha11Q91Y19 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha11Q91Y19 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha11Q91Y19 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdha11Q91Y19 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha11Q91Y19 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha11Q91Y19 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Pcdha11Q91Y19 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha11Q91Y19 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha11Q91Y19 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha11Q91Y19 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha11Q91Y19 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Pcdha11Q91Y19 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Pcdha11Q91Y19 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha11Q91Y19 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha11Q91Y19 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha11Q91Y19 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdha11Q91Y19 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.02■□□□□ 0.15
Pcdha11Q91Y19 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha11Q91Y19 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha11Q91Y19 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdha11Q91Y19 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms