Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb4Q91XZ6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Gm14859-201ENSMUST00000117752 357 ntBASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Gm27867-201ENSMUST00000184778 125 ntBASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Gm7367-201ENSMUST00000057611 492 ntBASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.22■□□□□ 0.03
Pcdhb4Q91XZ6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 Gm27357-201ENSMUST00000183754 135 ntBASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb4Q91XZ6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb4Q91XZ6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.21■□□□□ 0.02
Pcdhb4Q91XZ6 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb4Q91XZ6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb4Q91XZ6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb4Q91XZ6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb4Q91XZ6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 Gm15372-201ENSMUST00000120729 834 ntBASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb4Q91XZ6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms