Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Gm18489-201ENSMUST00000172565 551 ntBASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdhga9Q91XX9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Gm11764-201ENSMUST00000120221 623 ntBASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Gm5682-201ENSMUST00000173402 505 ntBASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Gm27628-201ENSMUST00000184911 107 ntBASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga9Q91XX9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Sybu-209ENSMUST00000228639 4113 ntBASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga9Q91XX9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Pcdhga9Q91XX9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhga9Q91XX9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Pcdhga9Q91XX9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhga9Q91XX9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.08■□□□□ 0.01
Pcdhga9Q91XX9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhga9Q91XX9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga9Q91XX9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Pcdhga9Q91XX9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms