Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trex1Q91XB0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.46■□□□□ 0.38
Trex1Q91XB0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Trex1Q91XB0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.45■□□□□ 0.38
Trex1Q91XB0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trex1Q91XB0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Mir7023-201ENSMUST00000185093 64 ntBASIC17.45■□□□□ 0.38
Trex1Q91XB0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trex1Q91XB0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trex1Q91XB0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.44■□□□□ 0.38
Trex1Q91XB0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trex1Q91XB0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trex1Q91XB0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.43■□□□□ 0.38
Trex1Q91XB0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.43■□□□□ 0.38
Trex1Q91XB0 Gm15483-201ENSMUST00000120338 456 ntBASIC17.43■□□□□ 0.38
Trex1Q91XB0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.43■□□□□ 0.38
Trex1Q91XB0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Gm27430-201ENSMUST00000184585 107 ntBASIC17.43■□□□□ 0.38
Trex1Q91XB0 Gm44333-201ENSMUST00000197168 107 ntBASIC17.43■□□□□ 0.38
Trex1Q91XB0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trex1Q91XB0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trex1Q91XB0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trex1Q91XB0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trex1Q91XB0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms