Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.53■□□□□ 0.4
Ddx41Q91VN6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx41Q91VN6 App-207ENSMUST00000227737 2827 ntBASIC17.53■□□□□ 0.4
Ddx41Q91VN6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx41Q91VN6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx41Q91VN6 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ddx41Q91VN6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.52■□□□□ 0.4
Ddx41Q91VN6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx41Q91VN6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx41Q91VN6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx41Q91VN6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx41Q91VN6 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.52■□□□□ 0.4
Ddx41Q91VN6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx41Q91VN6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.52■□□□□ 0.4
Ddx41Q91VN6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.52■□□□□ 0.4
Ddx41Q91VN6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.52■□□□□ 0.4
Ddx41Q91VN6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx41Q91VN6 Gm27702-201ENSMUST00000184512 56 ntBASIC17.52■□□□□ 0.4
Ddx41Q91VN6 Gm45167-201ENSMUST00000208007 322 ntBASIC17.52■□□□□ 0.4
Ddx41Q91VN6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.52■□□□□ 0.4
Ddx41Q91VN6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx41Q91VN6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx41Q91VN6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ddx41Q91VN6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Ddx41Q91VN6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx41Q91VN6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx41Q91VN6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Ddx41Q91VN6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Ddx41Q91VN6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx41Q91VN6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx41Q91VN6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx41Q91VN6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx41Q91VN6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx41Q91VN6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Gm37153-201ENSMUST00000193637 231 ntBASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx41Q91VN6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms