Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H1fooQ8VIK3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Ank2-226ENSMUST00000189368 339 ntBASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H1fooQ8VIK3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.8□□□□□ -0.36
H1fooQ8VIK3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Gm21362-201ENSMUST00000194272 928 ntBASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H1fooQ8VIK3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms