Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim60Q8VI40 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim60Q8VI40 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim60Q8VI40 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim60Q8VI40 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.8■□□□□ 0.12
Trim60Q8VI40 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim60Q8VI40 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.79■□□□□ 0.12
Trim60Q8VI40 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim60Q8VI40 Gm4459-201ENSMUST00000118750 468 ntBASIC15.79■□□□□ 0.12
Trim60Q8VI40 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms