Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Gm6888-201ENSMUST00000221983 706 ntBASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cspg4Q8VHY0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.08□□□□□ -0.31
Cspg4Q8VHY0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.08□□□□□ -0.31
Cspg4Q8VHY0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Cspg4Q8VHY0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Cspg4Q8VHY0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.08□□□□□ -0.31
Cspg4Q8VHY0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cspg4Q8VHY0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cspg4Q8VHY0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cspg4Q8VHY0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cspg4Q8VHY0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Gm18766-201ENSMUST00000189811 808 ntBASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cspg4Q8VHY0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Gm14767-201ENSMUST00000121559 586 ntBASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cspg4Q8VHY0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms