Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.76□□□□□ -0.21
Rab40bQ8VHP8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab40bQ8VHP8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Rab40bQ8VHP8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab40bQ8VHP8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rab40bQ8VHP8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rab40bQ8VHP8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab40bQ8VHP8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab40bQ8VHP8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab40bQ8VHP8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm8825-201ENSMUST00000182565 998 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm4518-201ENSMUST00000182638 718 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.74□□□□□ -0.21
Rab40bQ8VHP8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40bQ8VHP8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40bQ8VHP8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40bQ8VHP8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.73□□□□□ -0.21
Rab40bQ8VHP8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40bQ8VHP8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40bQ8VHP8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40bQ8VHP8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40bQ8VHP8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rab40bQ8VHP8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40bQ8VHP8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40bQ8VHP8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40bQ8VHP8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.73□□□□□ -0.21
Rab40bQ8VHP8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Rab40bQ8VHP8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40bQ8VHP8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.73□□□□□ -0.21
Rab40bQ8VHP8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rab40bQ8VHP8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms