Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx39aQ8VDW0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx39aQ8VDW0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx39aQ8VDW0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx39aQ8VDW0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Ddx39aQ8VDW0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx39aQ8VDW0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ddx39aQ8VDW0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Ddx39aQ8VDW0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx39aQ8VDW0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Gm44335-201ENSMUST00000196879 141 ntBASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Gm44297-201ENSMUST00000198304 141 ntBASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Gm44346-201ENSMUST00000198851 141 ntBASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Gm20553-201ENSMUST00000204205 844 ntBASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Gm45612-201ENSMUST00000211320 160 ntBASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx39aQ8VDW0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Gm10154-201ENSMUST00000084445 354 ntBASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx39aQ8VDW0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx39aQ8VDW0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.9■□□□□ 0.3
Ddx39aQ8VDW0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Ddx39aQ8VDW0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx39aQ8VDW0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx39aQ8VDW0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx39aQ8VDW0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx39aQ8VDW0 Rpph1-201ENSMUST00000175096 319 ntBASIC16.9■□□□□ 0.3
Ddx39aQ8VDW0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.9■□□□□ 0.3
Ddx39aQ8VDW0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx39aQ8VDW0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx39aQ8VDW0 Gm8396-201ENSMUST00000057361 823 ntBASIC16.9■□□□□ 0.3
Ddx39aQ8VDW0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ddx39aQ8VDW0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.9■□□□□ 0.3
Ddx39aQ8VDW0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms