Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Gm14822-201ENSMUST00000122247 291 ntBASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Gm18489-201ENSMUST00000172565 551 ntBASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Gm24513-201ENSMUST00000174964 138 ntBASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Mir3113-201ENSMUST00000175478 76 ntBASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ndc1Q8VCB1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Gm27397-201ENSMUST00000184997 107 ntBASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Gm2756-201ENSMUST00000195851 400 ntBASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Gm43575-201ENSMUST00000196420 516 ntBASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ndc1Q8VCB1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Mir8117-201ENSMUST00000184773 107 ntBASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Gm10175-201ENSMUST00000086013 645 ntBASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ndc1Q8VCB1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms