Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Gm18733-201ENSMUST00000173950 856 ntBASIC16.74■□□□□ 0.27
Rpap2Q8VC34 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.74■□□□□ 0.27
Rpap2Q8VC34 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rpap2Q8VC34 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Celf4-206ENSMUST00000224553 1729 ntBASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpap2Q8VC34 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.72■□□□□ 0.27
Rpap2Q8VC34 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpap2Q8VC34 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpap2Q8VC34 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms