Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Gm6550-201ENSMUST00000187574 993 ntBASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Atf7Q8R0S1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Atf7Q8R0S1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.02■□□□□ 0.48
Atf7Q8R0S1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atf7Q8R0S1 Gm11764-201ENSMUST00000120221 623 ntBASIC18.02■□□□□ 0.48
Atf7Q8R0S1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Atf7Q8R0S1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atf7Q8R0S1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Atf7Q8R0S1 Gm5864-201ENSMUST00000202263 970 ntBASIC18.02■□□□□ 0.48
Atf7Q8R0S1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Atf7Q8R0S1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atf7Q8R0S1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atf7Q8R0S1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Atf7Q8R0S1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Atf7Q8R0S1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Atf7Q8R0S1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atf7Q8R0S1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Atf7Q8R0S1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atf7Q8R0S1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.02■□□□□ 0.47
Atf7Q8R0S1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atf7Q8R0S1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atf7Q8R0S1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Atf7Q8R0S1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Celf4-206ENSMUST00000224553 1729 ntBASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
Atf7Q8R0S1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Atf7Q8R0S1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Atf7Q8R0S1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atf7Q8R0S1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atf7Q8R0S1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18■□□□□ 0.47
Atf7Q8R0S1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Atf7Q8R0S1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atf7Q8R0S1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atf7Q8R0S1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Atf7Q8R0S1 Gm13884-201ENSMUST00000118103 829 ntBASIC18■□□□□ 0.47
Atf7Q8R0S1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atf7Q8R0S1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18■□□□□ 0.47
Atf7Q8R0S1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18■□□□□ 0.47
Atf7Q8R0S1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atf7Q8R0S1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Atf7Q8R0S1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atf7Q8R0S1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atf7Q8R0S1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18■□□□□ 0.47
Atf7Q8R0S1 Gm29340-201ENSMUST00000188763 3854 ntBASIC18■□□□□ 0.47
Atf7Q8R0S1 Gm5184-201ENSMUST00000220417 1702 ntBASIC18■□□□□ 0.47
Atf7Q8R0S1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Atf7Q8R0S1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms