Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC9.63□□□□□ -0.87
Cystm1Q8K353 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Gm33142-201ENSMUST00000193913 867 ntBASIC9.63□□□□□ -0.87
Cystm1Q8K353 Gm21362-201ENSMUST00000194272 928 ntBASIC9.63□□□□□ -0.87
Cystm1Q8K353 Kcnk16-202ENSMUST00000225596 2127 ntBASIC9.63□□□□□ -0.87
Cystm1Q8K353 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Gm45638-201ENSMUST00000211507 2878 ntBASIC9.63□□□□□ -0.87
Cystm1Q8K353 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Gm26513-201ENSMUST00000181802 2489 ntBASIC9.62□□□□□ -0.87
Cystm1Q8K353 Spsb2-203ENSMUST00000112473 1322 ntBASIC9.62□□□□□ -0.87
Cystm1Q8K353 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC9.62□□□□□ -0.87
Cystm1Q8K353 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC9.62□□□□□ -0.87
Cystm1Q8K353 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC9.62□□□□□ -0.87
Cystm1Q8K353 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC9.62□□□□□ -0.87
Cystm1Q8K353 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Cystm1Q8K353 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms