Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cchcr1Q8K2I2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Cchcr1Q8K2I2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cchcr1Q8K2I2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cchcr1Q8K2I2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cchcr1Q8K2I2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cchcr1Q8K2I2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cchcr1Q8K2I2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Cchcr1Q8K2I2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cchcr1Q8K2I2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cchcr1Q8K2I2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cchcr1Q8K2I2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.08■□□□□ 0.48
Cchcr1Q8K2I2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.08■□□□□ 0.48
Cchcr1Q8K2I2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.08■□□□□ 0.48
Cchcr1Q8K2I2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cchcr1Q8K2I2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cchcr1Q8K2I2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cchcr1Q8K2I2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cchcr1Q8K2I2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cchcr1Q8K2I2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cchcr1Q8K2I2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cchcr1Q8K2I2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cchcr1Q8K2I2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cchcr1Q8K2I2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cchcr1Q8K2I2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cchcr1Q8K2I2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Grk6-207ENSMUST00000225925 2769 ntBASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Gm8318-201ENSMUST00000182954 872 ntBASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Gm18669-201ENSMUST00000216049 778 ntBASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.07■□□□□ 0.48
Cchcr1Q8K2I2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.06■□□□□ 0.48
Cchcr1Q8K2I2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Cchcr1Q8K2I2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms