Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.42■□□□□ 0.06
Clip4Q8CI96 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clip4Q8CI96 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Clip4Q8CI96 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
Clip4Q8CI96 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clip4Q8CI96 Gm12497-201ENSMUST00000138778 237 ntBASIC15.42■□□□□ 0.06
Clip4Q8CI96 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clip4Q8CI96 Gm6376-201ENSMUST00000209407 580 ntBASIC15.42■□□□□ 0.06
Clip4Q8CI96 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.42■□□□□ 0.06
Clip4Q8CI96 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.42■□□□□ 0.06
Clip4Q8CI96 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clip4Q8CI96 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clip4Q8CI96 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Clip4Q8CI96 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.42■□□□□ 0.06
Clip4Q8CI96 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clip4Q8CI96 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clip4Q8CI96 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clip4Q8CI96 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.41■□□□□ 0.06
Clip4Q8CI96 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clip4Q8CI96 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Clip4Q8CI96 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Gm4459-201ENSMUST00000118750 468 ntBASIC15.4■□□□□ 0.06
Clip4Q8CI96 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.4■□□□□ 0.06
Clip4Q8CI96 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clip4Q8CI96 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clip4Q8CI96 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Clip4Q8CI96 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms