Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rftn2Q8CHX7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Gm16026-204ENSMUST00000162652 683 ntBASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Gm8396-201ENSMUST00000057361 823 ntBASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rftn2Q8CHX7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Gm11745-201ENSMUST00000121669 448 ntBASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Gm43767-201ENSMUST00000198933 381 ntBASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Celf4-206ENSMUST00000224553 1729 ntBASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rftn2Q8CHX7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rftn2Q8CHX7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rftn2Q8CHX7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms