Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.92■□□□□ 0.62
Smc5Q8CG46 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smc5Q8CG46 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
Smc5Q8CG46 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc5Q8CG46 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Smc5Q8CG46 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Smc5Q8CG46 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc5Q8CG46 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc5Q8CG46 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Smc5Q8CG46 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smc5Q8CG46 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc5Q8CG46 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc5Q8CG46 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Smc5Q8CG46 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc5Q8CG46 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smc5Q8CG46 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc5Q8CG46 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc5Q8CG46 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc5Q8CG46 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Gm8655-201ENSMUST00000221159 852 ntBASIC18.9■□□□□ 0.62
Smc5Q8CG46 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc5Q8CG46 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Smc5Q8CG46 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smc5Q8CG46 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Gm23547-201ENSMUST00000158210 271 ntBASIC18.89■□□□□ 0.61
Smc5Q8CG46 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.89■□□□□ 0.61
Smc5Q8CG46 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.89■□□□□ 0.61
Smc5Q8CG46 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Gm9856-201ENSMUST00000217077 2578 ntBASIC18.89■□□□□ 0.61
Smc5Q8CG46 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.89■□□□□ 0.61
Smc5Q8CG46 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc5Q8CG46 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc5Q8CG46 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Gm27704-201ENSMUST00000185094 107 ntBASIC18.88■□□□□ 0.61
Smc5Q8CG46 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.88■□□□□ 0.61
Smc5Q8CG46 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Smc5Q8CG46 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.88■□□□□ 0.61
Smc5Q8CG46 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms